Liftover MCP server
This MCP server provides a programmatic interface to the Broad Institute's Liftover tool, which is available at liftover.broadinstitute.org.
Overview
What is Liftover MCP Server?
The Liftover MCP Server provides a programmatic interface to the Broad Institute's Liftover tool, enabling users to convert genomic coordinates between different assemblies.
How to use Liftover MCP Server?
To use the Liftover MCP Server, add it to your MCP server list and run the server using the provided commands. You can specify input parameters such as chromosome, position, and genome versions to perform liftover operations.
Key features of Liftover MCP Server?
- Programmatic access to the Liftover tool
- Support for single position, interval, and variant conversions
- Integration with FastMCP for easy server management
Use cases of Liftover MCP Server?
- Converting genomic coordinates from hg19 to hg38.
- Supporting bioinformatics research that requires genomic data alignment.
- Facilitating genetic variant analysis across different genome assemblies.
FAQ from Liftover MCP Server?
- What is the Liftover tool used for?
The Liftover tool is used to convert genomic coordinates between different genome assemblies.
- Is there any cost to use the Liftover MCP Server?
No, the Liftover MCP Server is free to use.
- What dependencies are required to run the server?
The server requires dependencies like
uv,mcp[cli],fastmcp,beautifulsoup4, andselenium.
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